rs11211026 chr1:44721613 G>A
- Sequence
cactacaaaaagtacacaaaatta[G/A]acaggcttatgaggctgaggtggg
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN FLI1_HUMAN DLX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.19 | -0.31 | 1.80 | n/a | No Hit | |||
| FLI1_HUMAN | -1.44 | 1.68 | 1.00 | n/a | No Hit | |||
| DLX1_HUMAN | 1.81 | -1.44 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood