ADASTRA v5.1.3
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rs11229664
chr11:58850603
G
>
A
Sequence
acgagagtgtgagccctctgtcat[G/A]cccagacagggccactagatggct
ASB in cell types
GM19240 (B cells Lymphoblastoid Cell Lines)
GM12892 (female B-cells lymphoblastoid cell line)
MS-1 (Small cell lung carcinoma)
GM23338
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(+2 others)
ASB for transcription factors
CTCF_HUMAN
STAG1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.84
1.54
1.00
1.2·10
-16
1.40
n/a
No Hit
STAG1_HUMAN
1.16
1.96
0.94
2.6·10
-4
1.60
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Visceral_Omentum
,
Esophagus_Mucosa
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)