rs112299392 chr12:109434284 G>A
- Sequence
tcggcctcccaaagtgctgggatt[G/A]caggcgtgagccaccgcgcccagc
- ASB in cell types
- D283 Med (medulloblastoma)
- ASB for transcription factors
- OTX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | -3.60 | 2.34 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg