ADASTRA v5.1.3
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rs11233
chr19:55643352
G
>
A
Sequence
ttctgctctctggagcggtgaacc[G/A]gtggttgtctgcggggaagagatg
ASB in cell types
K562 (myelogenous leukemia)
HEK293 (embryonic kidney)
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ZBT11_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT11_HUMAN
0.23
2.08
0.84
3.2·10
-3
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease
,
years of education
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Hippocampus
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Left_Ventricle
,
Lung
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)