ADASTRA v5.1.3
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rs11234604
chr11:86302338
G
>
A
Sequence
cagtcactatgtagtggaggggca[G/A]acaccctcccgcaaattctggaag
ASB in cell types
adult erythroblasts
CD14+ monocytes
22RV1 (prostate carcinoma)
ASB for transcription factors
RBBP5_HUMAN
STAT1_HUMAN
ANDR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBBP5_HUMAN
2.31
n/a
3.7·10
-4
1.00
3.00
n/a
n/a
STAT1_HUMAN
1.99
-0.90
5.0·10
-3
1.00
2.00
n/a
No Hit
ANDR_HUMAN
2.71
-1.91
0.02
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
autism
,
autism with high iq
,
ldl cholesterol change with statins
,
prop taste detection threshold
,
total cholesterol change with statins
GTEx eQTL
Esophagus_Muscularis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)