rs112409204 chr1:183023054 C>G

Sequence
gcgcggggagcgggtctgcgaggc[C/G]gcccttccctcccggcatgcacca
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
JUN_HUMAN CRTC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN 1.70 0.16 7.4·10-30.87 2.00 n/a No Hit
CRTC2_HUMAN 2.00 -1.58 0.031.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Thyroid

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