rs11259212 chr10:6495463 T>C
- Sequence
tcttcacctaaccagctctgtcac[T/C]cttcagctgtcagtttcaatgttc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -2.92 | 2.77 | 1.50 | n/a | No Hit | |||
| IKZF2_HUMAN | n/a | 2.36 | 2.00 | n/a | n/a | |||
| PKNX1_HUMAN | -3.05 | 2.05 | 1.50 | -4.49 | Discordant |
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Motif analysis
