rs11260822 chr1:16159316 C>T
- Sequence
gtcttataaagcggcaccaaaacg[C/T]ggtatttatagtgacataatcagc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- SP7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP7_HUMAN | n/a | 1.85 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Liver, Muscle_Skeletal, Nerve_Tibial, Stomach, Testis, Thyroid, Whole_Blood