rs11260841 chr1:16621240 G>A
- Sequence
gtgataaccaccacccaaggccat[G/A]gggactgcagggtgagtggcatgc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) WA09 (embryonic stem cells) HCT-116-RAD21-mAC HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN ZNF24_HUMAN MNT_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.45 | 0.57 | 2.74 | n/a | No Hit | |||
| RAD21_HUMAN | 2.60 | -4.57 | 2.75 | n/a | n/a | |||
| ZNF24_HUMAN | 2.48 | -4.39 | 2.50 | n/a | n/a | |||
| MNT_HUMAN | 2.10 | n/a | 3.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.18 | -1.09 | 2.67 | n/a | n/a |
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Motif analysis
