rs11280 chr6:41067119 T>C

Sequence
ctattatcaagccacctaactcct[T/C]acttttccacaaaaaaacacaacc
ASB in cell types
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.79 0.31 0.031.00 2.96
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  hip osteoarthritis,  knee osteoarthritis,  osteoarthritis,  osteoarthritis (females)
GTEx eQTL Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Nerve_Tibial,  Pancreas,  Testis,  Whole_Blood

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