rs112871767 chr11:114317926 G>A

Sequence
aacgctttccttggccctctgagc[G/A]ccagcagagggtgcacgtggctct
ASB in cell types
GM19240 (B cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.66 -2.22 6.2·10-101.00 1.00 -0.93 Weak Concordant
STAG1_HUMAN 2.17 -1.43 4.1·10-41.00 1.00 n/a n/a
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

No data available

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