rs113141647 chr19:3126157 C>T
- Sequence
caggacctgacaggtgctcacagg[C/T]ggcctctggtggctgctgctggga
- ASB in cell types
- GM19099 (female B-cells Lymphoblastoid Cell Lines) epidermal keratinocytes SK-N-SH (neuroblastoma) human astrocytes from spinal cord
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.55 | -0.13 | 1.40 | -0.52 | Weak Concordant |
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Motif analysis
