rs113372449 chr2:120735743 C>T
- Sequence
cctgtgctccccctttcccctccc[C/T]ccgccccggcggcgttcgggtccc
- ASB in cell types
- A549 (lung carcinoma) pancreas 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SIN3A_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.36 | 1.31 | 1.29 | n/a | No Hit | |||
| SIN3A_HUMAN | -2.21 | 3.00 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 1.90 | n/a | 2.00 | n/a | No Hit |
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