ADASTRA v5.1.3
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Bill Cipher
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rs11341
chr12:51352038
T
>
C
Sequence
ggctccagaaggctctcagggatg[T/C]aggcggcctcccgcagggttgagt
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPT5H_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPT5H_HUMAN
-2.34
2.45
1.00
0.02
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
GTEx eQTL
Adrenal_Gland
,
Artery_Aorta
,
Cells_Cultured_fibroblasts
,
Ovary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)