rs113522280 chr8:73746348 C>A
- Sequence
ggcgctccctctccctcgcagcca[C/A]accgtggctgcactcgccgtcctc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) breast tumor
- ASB for transcription factors
- PRD10_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRD10_HUMAN | -2.23 | 2.55 | 1.67 | n/a | n/a | |||
| ESR1_HUMAN | 2.40 | -1.31 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg