rs114119930 chr19:35335238 A>T
- Sequence
gcctttcagaggggatttcgggtg[A/T]gcaaaagtgattcaaagtggagaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZNF24_HUMAN SKIL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF24_HUMAN | 1.49 | -1.49 | 1.00 | n/a | n/a | |||
| SKIL_HUMAN | 2.25 | -1.91 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Cells_EBV-transformed_lymphocytes, Muscle_Skeletal, Nerve_Tibial, Ovary, Spleen, Thyroid