rs1143146 chr6:29942581 C>G
- Sequence
gccgtcatggcgccccgaaccctc[C/G]tcctgctactctcgggggccctgg
- ASB in cell types
- A549 (lung carcinoma) HCT-116 (colon carcinoma) LNCaP (prostate carcinoma) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- TBP_HUMAN RAD21_HUMAN JUN_HUMAN SPT5H_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBP_HUMAN | 2.06 | -0.80 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | 2.02 | 0.14 | 1.47 | n/a | n/a | |||
| JUN_HUMAN | 1.67 | -0.57 | 1.29 | n/a | No Hit | |||
| SPT5H_HUMAN | 1.18 | -0.52 | 1.48 | n/a | n/a | |||
| CREB1_HUMAN | 1.30 | -0.27 | 1.36 | n/a | No Hit |
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