rs114600948 chr1:12566137 C>T
- Sequence
agaactaacgactactcctccacg[C/T]gggattgtatttcctgctatgtta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KAISO_HUMAN MNT_HUMAN MITF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KAISO_HUMAN | 3.24 | -2.92 | 1.00 | -3.59 | Concordant | |||
| MNT_HUMAN | -0.63 | 1.91 | 1.00 | n/a | n/a | |||
| MITF_HUMAN | 1.55 | -1.55 | 1.00 | 4.27 | Discordant |
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Motif analysis
