rs1147141 chr15:50876739 A>C

Sequence
caaaacaaaacaaaacaaaacaaa[A/C]caaaacaaaaaaaaaaagaaggaa
ASB in cell types
GM12892 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.44 1.17 1.000.02 1.11 n/a No Hit
STAG1_HUMAN 1.75 -0.08 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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