rs114982608 chr1:941767 G>A
- Sequence
gaagggaggggccgcctgaggccc[G/A]agtccctgcccggccgctgagccc
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) HCT-116 (colon carcinoma)
- ASB for transcription factors
- ANDR_HUMAN ZN629_HUMAN BC11A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.73 | 0.10 | 2.40 | n/a | No Hit | |||
| ZN629_HUMAN | -1.66 | 2.71 | 2.00 | n/a | n/a | |||
| BC11A_HUMAN | n/a | 2.94 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Putamen_basal_ganglia, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood