rs115158741 chr6:28589363 C>G

Sequence
tttaaccacgactatacttaccta[C/G]tgtacccttgtggttggtcccatg
ASB in cell types
HepG2 (hepatoblastoma) pancreas
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.17 1.22 0.030.91 1.11 0.50 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta Artery_Tibial Lung Muscle_Skeletal Nerve_Tibial Thyroid Whole_Blood

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