rs115175315 chr13:96229531 G>A
- Sequence
ggtggagagaaagacaggaaaccc[G/A]ccctctagtgtctgctcttaaaag
- ASB in cell types
- foreskin keratinocyte HMEC (human mammary epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN SMC1A_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.23 | n/a | 2.00 | -3.12 | Concordant | |||
| SMC1A_HUMAN | 2.30 | -1.98 | 1.00 | n/a | n/a |
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Motif analysis
