rs11520772 chr7:27740857 A>T

Sequence
gggcggagttggcggttctggctg[A/T]tggcctgcttcacctggaatccat
ASB in cell types
K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
ESR1_HUMAN FLI1_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 1.92 -4.59 0.031.00 2.00 n/a No Hit
FLI1_HUMAN 0.18 2.12 1.000.03 1.00 n/a No Hit
IKZF1_HUMAN -0.07 1.09 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin homa-ir rheumatoid arthritis total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Esophagus_Mucosa Lung Muscle_Skeletal Nerve_Tibial Testis Thyroid

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