rs115210372 chr19:14554610 G>A
- Sequence
gtgtgtgccaggccttcaggctgc[G/A]cctccaggggatgagcaggaattg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- CTCF_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.38 | -1.02 | 2.25 | -0.63 | Weak Concordant | |||
| ZFX_HUMAN | 2.92 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
