rs11540278 chr1:94927037 C>T

Sequence
gaggcgcaggagacggccgcgggg[C/T]gcgggcggtgcctgggcgactggg
ASB in cell types
HEK293 (embryonic kidney) foreskin keratinocyte 22RV1 (prostate carcinoma) HepG2 (hepatoblastoma)
ASB for transcription factors
ANDR_HUMAN ZN423_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.60 -0.21 8.7·10-30.96 2.00 n/a No Hit
ZN423_HUMAN n/a 1.88 1.000.05 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

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