rs11551944 chr11:63681653 C>A
- Sequence
gcgtagccatggcggagccgtcgg[C/A]ggccactcagtcccattccatctc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) renal cortex 22RV1 (prostate carcinoma) adult erythroblasts
- ASB for transcription factors
- FOXK2_HUMAN CREB1_HUMAN ANDR_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.12 | n/a | 1.00 | n/a | n/a | |||
| CREB1_HUMAN | 2.83 | -2.82 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.90 | n/a | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 2.37 | n/a | 3.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Muscularis, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood