rs11552783 chr6:42048581 G>A

Sequence
gccgcctccggagcctgcctttgg[G/A]gagtgggggtggtcgcaaccacca
ASB in cell types
K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.19 -0.72 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts

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