rs11556146 chr4:75644369 A>G
- Sequence
caaagttgttaactgaagaacaag[A/G]taaataatatgctagtccatttta
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.47 | 1.81 | 1.78 | 1.87 | Weak Concordant | |||
| ANDR_HUMAN | 2.80 | 1.16 | 1.50 | n/a | No Hit |
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Motif analysis
