ADASTRA v5.1.3
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rs11574
chr1:23559007
T
>
C
Sequence
cgttggagatgacaagttccggag[T/C]gagctcggctgtctgattagagga
ASB in cell types
HEK293 (embryonic kidney)
primary B-CLL cells
22RV1 (prostate carcinoma)
ASB for transcription factors
BRD4_HUMAN
ANDR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN
0.32
1.89
1.00
2.4·10
-4
1.43
n/a
n/a
ANDR_HUMAN
-1.09
2.24
1.00
0.04
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
body mass index (bmi)
,
height
GTEx eQTL
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)