rs11577232 chr1:53655060 A>G

Sequence
agcaggtgacggggcctagtgcac[A/G]gggccagtgtgacgctcacacacc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
RING2_HUMAN LMBL2_HUMAN EMSY_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RING2_HUMAN -1.00 3.44 1.002.9·10-5 1.00 n/a n/a
LMBL2_HUMAN -2.61 3.01 1.004.2·10-5 1.00 n/a n/a
EMSY_HUMAN -1.75 2.02 1.001.7·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP height,  homa-b
GTEx eQTL Cells_Cultured_fibroblasts

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