ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs11585994
chr1:8198166
T
>
C
Sequence
atccagaccctgcaggggggacac[T/C]gggatcaccatcggcctctctgct
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
HKC8 (kidney proximal tubule cell line)
ASB for transcription factors
ESR1_HUMAN
EPAS1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
1.01
0.27
4.2·10
-7
1.00
1.97
n/a
No Hit
EPAS1_HUMAN
-0.21
1.59
1.00
3.0·10
-3
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
fasting blood glucose
,
height
,
parkinsons disease
GTEx eQTL
Cells_Cultured_fibroblasts
,
Liver
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)