rs11590427 chr1:16624312 C>T
- Sequence
tcctctgacacggtcctgccttca[C/T]gctccgcaggccgccagctgcaca
- ASB in cell types
- HEK293 (embryonic kidney) RKO (colon carcinoma cell)
- ASB for transcription factors
- SP5_HUMAN HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP5_HUMAN | 2.93 | -5.44 | 2.00 | n/a | n/a | |||
| HNF4A_HUMAN | 2.16 | -2.05 | 1.33 | n/a | No Hit |
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