rs11600431 chr11:6481406 G>C
- Sequence
tataagggcggagctgacgtcgca[G/C]ccagggcagggcgatactcgagct
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) MDM(monocyte derived macrophages) monocytes from periferal blood
- ASB for transcription factors
- SPI1_HUMAN ANDR_HUMAN SRBP2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.75 | 0.43 | 1.67 | n/a | No Hit | |||
| ANDR_HUMAN | 2.40 | -0.42 | 1.93 | n/a | No Hit | |||
| SRBP2_HUMAN | 1.29 | 0.33 | 2.12 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, fasting blood glucose, homa-b, ldl cholesterol, serum creatinine, total cholesterol
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood