ADASTRA v5.1.3
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rs11602700
chr11:63987039
G
>
T
Sequence
ccctgaggcctgcgactttttctg[G/T]tagagccgcctcttctggccttgc
ASB in cell types
MDA-MB-231ERb(triple negative breast cancer)
ASB for transcription factors
ESR2_HUMAN
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR2_HUMAN
1.74
-0.66
0.01
1.00
1.00
n/a
No Hit
BRD4_HUMAN
1.50
-0.96
0.05
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
basophil count
,
coronary artery disease (cad), combined control dataset
,
ldl cholesterol
,
lp-pla2 mass
,
systolic blood pressure (sbp)
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)