rs11603094 chr11:111436971 C>T
- Sequence
ccctggggctgtgtggcaagcaga[C/T]gctgcagggcagaacaaaagccta
- ASB in cell types
- BEAS-2B (bronchial epithelium) CTV-1 (Adult T acute lymphoblastic leukemia) MKL-1 (Merkel cell carcinoma) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- GCR_HUMAN ATOH1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.28 | -0.13 | 1.06 | n/a | No Hit | |||
| ATOH1_HUMAN | -1.60 | 1.93 | 1.00 | 4.37 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood