rs11606612 chr11:71453001 C>A
- Sequence
cgggtttgcccgcaagggccgggc[C/A]ggggccggggcctgggacgtgggt
- ASB in cell types
- keratinocytes monocytes from periferal blood RCH-ACV (B acute lymphoblastic leukemia with t(1;19)(q23;p13.3) E2A-PBX1 (TCF3-PBX1))
- ASB for transcription factors
- SNAI2_HUMAN SRBP2_HUMAN KMT2A_HUMAN RBM25_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | n/a | 3.92 | 1.50 | 3.84 | Concordant | |||
| SRBP2_HUMAN | 2.94 | n/a | 3.00 | n/a | No Hit | |||
| KMT2A_HUMAN | 2.27 | n/a | 1.00 | n/a | n/a | |||
| RBM25_HUMAN | -0.34 | 1.72 | 2.00 | n/a | n/a |
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Motif analysis
