rs11632116 chr15:49848338 G>T

Sequence
agcacacaatattcatgcctcctt[G/T]gttaaataagagacgtgttttcca
ASB for transcription factors
FOXA2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 0.78 -0.02 0.031.00 1.06 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  infant head circumference
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Pancreas,  Testis,  Thyroid

Download