rs11652860 chr17:48555317 G>C
- Sequence
gaaaagaggagagaagcaggaaga[G/C]agaggggagagagagagggagaga
- ASB in cell types
- K562 (myelogenous leukemia) gastroesophageal sphincter HMEC (human mammary epithelial cells) adrenal gland
- ASB for transcription factors
- CTCF_HUMAN PBX2_HUMAN ZN596_HUMAN MEIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.74 | 0.04 | 1.07 | n/a | No Hit | |||
| PBX2_HUMAN | n/a | 1.99 | 2.00 | n/a | No Hit | |||
| ZN596_HUMAN | 1.17 | -1.17 | 1.00 | n/a | n/a | |||
| MEIS2_HUMAN | n/a | 1.76 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 0.24 | 1.41 | 1.83 | n/a | No Hit |
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