rs11657517 chr17:47266347 C>T
- Sequence
cctcattagggtggcctgttccta[C/T]agtccagcatcctgtctcactgga
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.27 | 0.72 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, birth weight, body mass index (bmi), crohns disease, combined control dataset, gender differentiated, hdl cholesterol, irritible bowel syndrome, lp-pla2 activity, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Coronary, Artery_Tibial, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood