rs11657989 chr17:31068728 C>A

Sequence
gcctgttggttttattgatctcct[C/A]atcatttctctatgtaacctctga
ASB for transcription factors
STAG1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.01 -0.08 0.031.00 1.13 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad),  height,  ldl cholesterol,  total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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