rs11667713 chr19:2841720 C>T
- Sequence
cgggagcctgggccccgggggtcc[C/T]gcccggccccgcctcccgcgctga
- ASB in cell types
- upper lobe of left lung GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN RBM25_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.59 | 1.04 | 1.11 | n/a | No Hit | |||
| RBM25_HUMAN | 1.54 | n/a | 6.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Putamen_basal_ganglia, Esophagus_Mucosa, Ovary, Testis, Whole_Blood