rs11669005 chr19:44577250 A>G
- Sequence
tgaggttggtacaaaagtaattgc[A/G]gattttgccattacttttgcacca
- ASB in cell types
- GSC23 (Glioblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.61 | 1.16 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid, Whole_Blood