rs116839680 chr1:161440708 C>T
- Sequence
ggaggccaaggaggcccagaaggc[C/T]aaagggccaggcaggccaggcccg
- ASB in cell types
- adrenal gland T98G (Glioblastoma) pancreas
- ASB for transcription factors
- TF3C2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF3C2_HUMAN | 2.54 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Whole_Blood