rs11688 chr1:58782321 C>T

Sequence
cttcctctccgccttgatccgctc[C/T]tgggactccatgtcgatgggggac
ASB in cell types
22RV1 (prostate carcinoma) macrophages form periferal blood
ASB for transcription factors
ANDR_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.37 n/a 3.1·10-41.00 2.00 n/a No Hit
SPI1_HUMAN 1.20 0.03 0.041.00 1.78 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus hdl cholesterol premature ovarian failure
GTEx eQTL Brain_Frontal_Cortex_BA9 Skin_Not_Sun_Exposed_Suprapubic

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