rs11694824 chr2:106270228 A>G

Sequence
aaaccacgcccacctaccgaaccc[A/G]ccccccaccgaaccaagcctggcg
ASB in cell types
HEK293 (embryonic kidney) ESO-26 (Gastroesophageal junction adenocarcinoma)
ASB for transcription factors
KLF9_HUMAN KLF5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KLF9_HUMAN -2.09 2.49 1.008.5·10-3 1.00 1.48 Weak Concordant
KLF5_HUMAN -2.18 2.56 1.000.01 1.00 -1.44 Weak Discordant
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Motif analysis

KLF5_HUMAN Weak Discordant
KLF5_HUMAN pic

Genetic associations

GRASP alzheimers disease diabetic retinopathy in type 2 diabetes mellitus ldl cholesterol triglycerides change with statins
GTEx eQTL Artery_Tibial Heart_Atrial_Appendage Thyroid

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