ADASTRA v5.1.3
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rs11694824
chr2:106270228
A
>
G
Sequence
aaaccacgcccacctaccgaaccc[A/G]ccccccaccgaaccaagcctggcg
ASB in cell types
HEK293 (embryonic kidney)
ESO-26 (Gastroesophageal junction adenocarcinoma)
ASB for transcription factors
KLF9_HUMAN
KLF5_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KLF9_HUMAN
-2.09
2.49
1.00
8.5·10
-3
1.00
1.48
Weak Concordant
KLF5_HUMAN
-2.18
2.56
1.00
0.01
1.00
-1.44
Weak Discordant
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5
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Motif analysis
KLF5_HUMAN
Weak Discordant
Show reverse complement
Show rev. comp.
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KLF9_HUMAN
Weak Concordant
Genetic associations
GRASP
alzheimers disease
,
diabetic retinopathy in type 2 diabetes mellitus
,
ldl cholesterol
,
triglycerides change with statins
GTEx eQTL
Artery_Tibial
,
Heart_Atrial_Appendage
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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