rs117056373 chr12:121399919 T>C

Sequence
ttcgctcggggcggaaaagaatcc[T/C]ccccgcgcactcccagccaggagg
ASB in cell types
LNCaP (prostate carcinoma) naive IgD+ B cells MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ZBT40_HUMAN TBP_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT40_HUMAN 3.29 -3.08 6.1·10-51.00 1.00 n/a n/a
TBP_HUMAN 1.31 -0.04 7.9·10-30.98 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

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