rs11729906 chr4:153058821 A>T
- Sequence
agacaaggaactggcactacaaac[A/T]aacaaataaataaatgaaataagc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN TLE3_HUMAN A2NVP9_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.08 | 2.09 | 1.62 | -3.39 | Discordant | |||
| TLE3_HUMAN | -1.30 | 2.29 | 2.00 | n/a | n/a | |||
| A2NVP9_HUMAN | -0.91 | 1.88 | 2.00 | n/a | n/a |
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Motif analysis
