ADASTRA v5.1.3
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rs117532831
chr12:111599646
G
>
A
Sequence
ggccgggagggacacgtgaggagc[G/A]ggcggcgcgctgggttgctttctc
ASB in cell types
22RV1 (prostate carcinoma)
fetal bone marrow-derived mononuclear cells
MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
ANDR_HUMAN
CDK9_HUMAN
KMT2A_HUMAN
FLI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
3.09
n/a
9.2·10
-5
1.00
2.50
n/a
No Hit
CDK9_HUMAN
-0.08
1.96
1.00
2.3·10
-3
1.00
n/a
n/a
KMT2A_HUMAN
2.81
n/a
6.7·10
-3
1.00
1.50
n/a
n/a
FLI1_HUMAN
-0.87
1.84
1.00
0.04
2.00
n/a
No Hit
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Nerve_Tibial
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)