rs117538533 chr16:29816149 T>G
- Sequence
gcagcctgggaggcgggtcttagc[T/G]ccaggtgcgtacggcatctgactt
- ASB in cell types
- keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.67 | -4.74 | 1.50 | 1.75 | Weak Discordant |
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Motif analysis
