rs117593705 chr19:1021501 T>C
- Sequence
tttgattgaagggcttaaaatagg[T/C]gtgacagtaacccttgagtcgtgc
- ASB in cell types
- HEK293 (embryonic kidney) 22RV1 (prostate carcinoma) HCT-116 (colon carcinoma)
- ASB for transcription factors
- ANDR_HUMAN ZN596_HUMAN ZN549_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.93 | n/a | 2.00 | n/a | No Hit | |||
| ZN596_HUMAN | 2.89 | -5.22 | 2.00 | n/a | n/a | |||
| ZN549_HUMAN | 2.82 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Pancreas, Testis, Thyroid